STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG7Autophagy related 7. (723 aa)    
Predicted Functional Partners:
ATG3
Autophagy related 3.
    
 0.999
ATG12
Autophagy related 12.
    
 0.998
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.994
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.991
ENSPCLP00000022525
annotation not available
   
 0.991
ATG5
Autophagy related 5.
    
 0.989
BIRC6
Baculoviral IAP repeat containing 6.
  
 0.977
TRIP12
Thyroid hormone receptor interactor 12.
    
 0.968
UBE2V1
Ubiquitin conjugating enzyme E2 V1.
   
 
 0.962
ATG16L1
Autophagy related 16 like 1.
     
 0.936
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.