Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATG7Autophagy related 7. (723 aa)    
Predicted Functional Partners:
ATG5
Autophagy related 5.
    
 0.999
ATG12
Autophagy related 12.
    
 0.999
ATG3
Autophagy related 3.
    
 0.999
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.999
MAP1LC3C
Microtubule associated protein 1 light chain 3 gamma.
   
 0.996
GABARAPL1
GABA type A receptor associated protein like 1.
   
 0.996
MAP1LC3A
Microtubule associated protein 1 light chain 3 alpha.
   
 0.994
ENSPCLP00000022525
annotation not available
   
 0.968
ENSPCLP00000011594
annotation not available
    
 
 0.956
ENSPCLP00000024553
annotation not available
   
 0.944
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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