Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCLP00000001730annotation not available (736 aa)    
Predicted Functional Partners:
USP7
Ubiquitin specific peptidase 7.
    
 0.999
ERCC8
ERCC excision repair 8, CSA ubiquitin ligase complex subunit.
    
 0.996
ELOF1
Elongation factor 1 homolog.
    
 
 0.946
DDB1
Damage specific DNA binding protein 1.
    
 0.932
ERCC6
ERCC excision repair 6, chromatin remodeling factor.
    
 0.903
RBX1
Ring-box 1.
    
 0.896
USP40
Ubiquitin specific peptidase 40.
    
 0.833
ENSPCLP00000015797
annotation not available
    
 0.832
ENSPCLP00000003404
annotation not available
    
  0.831
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
  0.831
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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