Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PKDCCProtein kinase domain containing, cytoplasmic. (500 aa)    
Predicted Functional Partners:
IFT140
Intraflagellar transport 140.
      
 0.564
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3.
      
 0.555
XPC
XPC complex subunit, DNA damage recognition and repair factor.
      
 0.549
KBTBD12
Kelch repeat and BTB domain containing 12.
      
 0.508
TRAF7
TNF receptor associated factor 7.
   
 0.505
ENSPCLP00000000798
annotation not available
      
 0.500
GAK
Cyclin G associated kinase.
    
 0.490
TRAPPC6B
Trafficking protein particle complex 6B.
      
 0.485
GPD1L
Glycerol-3-phosphate dehydrogenase 1 like.
    
  0.471
ENSPCLP00000005238
annotation not available
     
 0.471
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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