STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM53AFamily with sequence similarity 53 member A. (392 aa)    
Predicted Functional Partners:
TMEM129
Transmembrane protein 129.
      
 0.633
DCAF7
DDB1 and CUL4 associated factor 7.
    
 
 0.618
GTF2E1
General transcription factor IIE subunit 1.
      
 0.555
GTF3C3
General transcription factor IIIC subunit 3.
      
 0.542
DYRK1A
Dual specificity tyrosine phosphorylation regulated kinase 1A.
    
 
 0.515
ENSPCLP00000001739
annotation not available
      
 0.467
DIS3L2
DIS3 like 3'-5' exoribonuclease 2.
      
 0.451
EVC2
EvC ciliary complex subunit 2.
      
 0.450
ENSPCLP00000011576
annotation not available
      
 0.450
KCNK1
Potassium two pore domain channel subfamily K member 1.
      
 0.449
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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