Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCLP00000001739annotation not available (301 aa)    
Predicted Functional Partners:
NCBP1
Nuclear cap binding protein subunit 1.
    
 0.897
ERI1
Exoribonuclease 1.
    
 
 0.882
UPF1
UPF1 RNA helicase and ATPase.
    
 
 0.856
LSM10
LSM10, U7 small nuclear RNA associated.
   
 
 0.810
LSM11
LSM11, U7 small nuclear RNA associated.
     
 0.800
PCNA
Proliferating cell nuclear antigen.
   
  
 0.752
MCM7
Minichromosome maintenance complex component 7.
   
  
 0.739
ALYREF
Aly/REF export factor.
   
 
  0.727
RRM2B
Ribonucleotide reductase regulatory TP53 inducible subunit M2B.
   
  
 0.693
RRM2
Ribonucleotide reductase regulatory subunit M2.
   
  
 0.693
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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