Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TACC3Transforming acidic coiled-coil containing protein 3. (886 aa)    
Predicted Functional Partners:
CKAP5
Cytoskeleton associated protein 5.
    
 0.951
AURKA
Aurora kinase A.
    
 0.704
EIF4E1B
Eukaryotic translation initiation factor 4E family member 1B.
    
 
 0.588
EIF4E
Eukaryotic translation initiation factor 4E.
    
 
 0.588
ENSPCLP00000001568
annotation not available
    
 
 0.537
NME8
NME/NM23 family member 8.
   
   0.506
KIF11
Kinesin family member 11.
    
 
 0.501
ENSPCLP00000018191
annotation not available
    
 0.491
CDK5RAP2
CDK5 regulatory subunit associated protein 2.
    
 
 0.488
ITFG1
Integrin alpha FG-GAP repeat containing 1.
    
 
 0.475
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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