Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HHATHedgehog acyltransferase. (387 aa)    
Predicted Functional Partners:
HHATL
Hedgehog acyltransferase like.
     
0.901
SHH
Sonic hedgehog signaling molecule.
    
 0.814
DHH
Desert hedgehog signaling molecule.
    
 0.777
IHH
Indian hedgehog signaling molecule.
    
 0.762
PORCN
Porcupine O-acyltransferase.
      
 0.615
MBOAT2
Membrane bound O-acyltransferase domain containing 2.
      
 0.614
MBOAT4
Membrane bound O-acyltransferase domain containing 4.
      
 0.596
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
  
 0.561
MAFF
MAF bZIP transcription factor F.
      
 0.554
MLANA
melan-A.
      
 0.554
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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