STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HHATHedgehog acyltransferase. (387 aa)    
Predicted Functional Partners:
AASDH
Aminoadipate-semialdehyde dehydrogenase.
  
  
 0.898
NDUFAB1
NADH:ubiquinone oxidoreductase subunit AB1.
  
 
 0.881
ENSPCLP00000018186
annotation not available
  
 
 0.881
DHH
Desert hedgehog signaling molecule.
    
 0.796
SHH
Sonic hedgehog signaling molecule.
    
 0.719
IHH
Indian hedgehog signaling molecule.
    
 0.713
MBOAT4
Membrane bound O-acyltransferase domain containing 4.
      
 0.567
SCUBE2
Signal peptide, CUB domain and EGF like domain containing 2.
      
 0.567
PTCH1
Patched 1.
    
 
 0.498
SOAT1
Sterol O-acyltransferase 1.
   
  
 0.413
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.