STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LETM1Leucine zipper and EF-hand containing transmembrane protein 1. (757 aa)    
Predicted Functional Partners:
NSD2
Nuclear receptor binding SET domain protein 2.
      
 0.756
NELFA
Negative elongation factor complex member A.
      
 0.685
MRPL13
Mitochondrial ribosomal protein L13.
   
   0.600
RPL11
Ribosomal protein L11.
    
   0.595
RPL23
Ribosomal protein L23.
    
   0.595
RPS11
Ribosomal protein S11.
    
   0.595
RPS18
Ribosomal protein S18.
    
   0.595
ENSPCLP00000022861
annotation not available
    
   0.595
ENSPCLP00000017675
annotation not available
    
 
 0.594
MRPL22
Mitochondrial ribosomal protein L22.
   
 
 0.590
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.