Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NELFANegative elongation factor complex member A. (569 aa)    
Predicted Functional Partners:
NELFCD
Negative elongation factor complex member C/D.
    
 0.999
NELFB
Negative elongation factor complex member B.
   
 0.999
NELFE
Negative elongation factor complex member E.
   
 0.999
SUPT5H
SPT5 homolog, DSIF elongation factor subunit.
    
 0.982
SUPT4H1
SPT4 homolog, DSIF elongation factor subunit.
    
 0.974
CDK9
Cyclin dependent kinase 9.
     
 0.967
ENSPCLP00000016470
annotation not available
    
  0.945
IGHMBP2
Immunoglobulin mu DNA binding protein 2.
   
   0.936
POLR2C
RNA polymerase II subunit C.
    
 0.917
POLR2I
RNA polymerase II subunit I.
    
  0.907
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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