Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC30A1Solute carrier family 30 member 1. (516 aa)    
Predicted Functional Partners:
SLC30A6
Solute carrier family 30 member 6.
    
 
 0.811
SLC30A9
Solute carrier family 30 member 9.
   
 
 0.755
CSGALNACT1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1.
    
   0.700
SLC39A9
Solute carrier family 39 member 9.
    
 
 0.687
SLC39A13
Solute carrier family 39 member 13.
   
 0.685
RD3
Retinal degeneration 3, GUCY2D regulator.
      
 0.625
SLC35B3
Solute carrier family 35 member B3.
   
 
 0.623
SLC39A1
Solute carrier family 39 member 1.
    
 
 0.623
GOLT1B
Golgi transport 1B.
     
 0.619
SLC35C1
Solute carrier family 35 member C1.
      
 0.615
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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