Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ATF3Activating transcription factor 3. (181 aa)    
Predicted Functional Partners:
JUN
Jun proto-oncogene, AP-1 transcription factor subunit.
   
 0.998
ENSPCLP00000016614
annotation not available
   
 0.989
ATF4
Activating transcription factor 4.
    
 0.987
CEBPB
CCAAT enhancer binding protein beta.
   
 0.924
CEBPG
CCAAT enhancer binding protein gamma.
   
 0.921
ENSPCLP00000003224
annotation not available
    
 
 0.920
ENSPCLP00000019803
annotation not available
    
 
 0.920
BATF3
Basic leucine zipper ATF-like transcription factor 3.
    
 
 0.874
JUND
JunD proto-oncogene, AP-1 transcription factor subunit.
   
 0.827
ENSPCLP00000019094
annotation not available
   
 0.827
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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