STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TATDN3TatD DNase domain containing 3. (271 aa)    
Predicted Functional Partners:
ENSPCLP00000000035
annotation not available
      
 0.739
RPS6KC1
Ribosomal protein S6 kinase C1.
      
 0.739
OTOL1
Otolin 1.
      
 0.727
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.726
KATNAL2
Katanin catalytic subunit A1 like 2.
     
 0.686
SKAP2
Src kinase associated phosphoprotein 2.
      
 0.664
SHLD1
Shieldin complex subunit 1.
      
 0.653
OPTN
Optineurin.
      
 0.652
APLF
Aprataxin and PNKP like factor.
   
  
 0.649
TATDN1
TatD DNase domain containing 1.
      
 0.627
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.