STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TATDN3TatD DNase domain containing 3. (271 aa)    
Predicted Functional Partners:
KATNAL2
Katanin catalytic subunit A1 like 2.
     
 0.537
MBLAC1
Metallo-beta-lactamase domain containing 1.
      
 0.537
YARS1
tyrosyl-tRNA synthetase 1.
  
 
 0.500
ENSPCLP00000000035
annotation not available
      
 0.491
OTOL1
Otolin 1.
      
 0.491
RPS6KC1
Ribosomal protein S6 kinase C1.
      
 0.489
LYPD6B
LY6/PLAUR domain containing 6B.
      
 0.485
SHLD1
Shieldin complex subunit 1.
      
 0.478
SKAP2
Src kinase associated phosphoprotein 2.
      
 0.477
GPCPD1
Glycerophosphocholine phosphodiesterase 1.
      
 0.476
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.