Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
VASH2Vasohibin 2. (333 aa)    
Predicted Functional Partners:
SVBP
Small vasohibin binding protein.
    
 0.977
IFNG
Interferon gamma.
      
 0.708
TTL
Tubulin tyrosine ligase.
      
 0.615
DUSP15
Dual specificity phosphatase 15.
      
 0.597
CDKN1B
Cyclin dependent kinase inhibitor 1B.
      
 0.561
HSF2
Heat shock transcription factor 2.
      
 0.557
EP300
E1A binding protein p300.
      
 0.556
TNNT3
Troponin T3, fast skeletal type.
      
 0.556
ZMAT3
Zinc finger matrin-type 3.
      
 0.555
PGR
Progesterone receptor.
      
 0.540
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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