STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PROX1Prospero homeobox 1. (736 aa)    
Predicted Functional Partners:
LYVE1
Lymphatic vessel endothelial hyaluronan receptor 1.
      
 0.645
LHX3
LIM homeobox 3.
      
 0.565
VEGFC
Vascular endothelial growth factor C.
      
 0.562
LHX4
LIM homeobox 4.
      
 0.541
SOX18
SRY-box transcription factor 18.
   
  
 0.479
FLT4
Fms related tyrosine kinase 4.
      
 0.477
SOX3
SRY-box transcription factor 3.
   
  
 0.411
NR2F2
Nuclear receptor subfamily 2 group F member 2.
    
 
 0.409
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.