Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LYPLAL1Lysophospholipase like 1. (247 aa)    
Predicted Functional Partners:
SLC30A8
Solute carrier family 30 member 8.
      
 0.763
MB
Myoglobin.
    
   0.717
CHAF1B
Chromatin assembly factor 1 subunit B.
    
 
 0.697
SLC35D3
Solute carrier family 35 member D3.
      
 0.692
ASF1A
Anti-silencing function 1A histone chaperone.
    
 
 0.644
ZDHHC23
Zinc finger DHHC-type containing 23.
    
 
 0.623
LARP6
La ribonucleoprotein 6, translational regulator.
      
 0.615
ENSPCLP00000020948
annotation not available
      
 0.615
ABHD17C
Abhydrolase domain containing 17C.
     
 0.609
ABHD17B
Abhydrolase domain containing 17B.
     
 0.609
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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