Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
RAB3GAP2RAB3 GTPase activating non-catalytic protein subunit 2. (1409 aa)    
Predicted Functional Partners:
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
 0.999
VAPB
VAMP associated protein B and C.
   
 
 0.929
TBC1D20
TBC1 domain family member 20.
      
 0.816
TMCO4
Transmembrane and coiled-coil domains 4.
      
 0.798
RAB18
RAB18, member RAS oncogene family.
     
 0.766
ENSPCLP00000012581
annotation not available
     
 0.766
VAPA
VAMP associated protein A.
   
 
 0.745
GDI2
GDP dissociation inhibitor 2.
     
 0.735
C2CD2
C2 calcium dependent domain containing 2.
      
 0.729
NBAS
NBAS subunit of NRZ tethering complex.
      
 0.699
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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