Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ADD1Adducin 1. (764 aa)    
Predicted Functional Partners:
ADD3
Adducin 3.
   
  0.999
ADD2
Adducin 2.
   
 0.999
ANKRD29
Ankyrin repeat domain 29.
    
  0.979
DMTN
Dematin actin binding protein.
    
 0.869
XYLB
Xylulokinase.
  
 
 0.777
SPTAN1
Spectrin alpha, non-erythrocytic 1.
   
 
 0.754
ABLIM1
Actin binding LIM protein 1.
    
 0.723
ENOPH1
Enolase-phosphatase 1.
  
 
 0.704
TPI1
Triosephosphate isomerase 1.
    
 0.697
TKT
Transketolase.
    
 0.696
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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