Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCLP00000001879annotation not available (860 aa)    
Predicted Functional Partners:
MYD88
MYD88 innate immune signal transduction adaptor.
    
 0.992
LY96
Lymphocyte antigen 96.
    
 0.808
TRAF6
TNF receptor associated factor 6.
   
 0.777
IRAK2
Interleukin 1 receptor associated kinase 2.
    
 0.741
ENSPCLP00000017795
annotation not available
    
 0.738
ENSPCLP00000017800
annotation not available
    
 0.738
TIRAP
TIR domain containing adaptor protein.
   
 0.698
TLR3
Toll like receptor 3.
    
 
 0.684
IL6
Interleukin 6.
   
 
 0.674
TLR7
Toll like receptor 7.
   
 
 0.653
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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