STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CAPN2Calpain 2. (736 aa)    
Predicted Functional Partners:
TLN2
Talin 2.
    
 0.952
TLN1
Talin 1.
    
 0.947
CAST
Calpastatin.
   
 0.942
ENSPCLP00000004606
annotation not available
    
  0.924
CAPN11
Calpain 11.
  
  
 
0.919
CAPN1
Calpain 1.
  
  
 
0.910
LRGUK
Leucine rich repeats and guanylate kinase domain containing.
    
 
 0.577
CASP9
Caspase 9.
    
 0.557
GZMM
Granzyme M.
    
 
 0.551
CAPN8
Calpain 8.
  
  
 
0.545
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.