Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NVLNuclear VCP like. (856 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 
 0.976
RPF2
Ribosome production factor 2 homolog.
   
 
 0.941
POLR1A
RNA polymerase I subunit A.
   
   0.936
PES1
Pescadillo ribosomal biogenesis factor 1.
   
 
 0.925
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
   
 
 0.924
RRP8
Ribosomal RNA processing 8.
   
   0.898
NOC3L
NOC3 like DNA replication regulator.
   
  
 0.895
GPATCH4
G-patch domain containing 4.
   
   0.893
MAK16
MAK16 homolog.
   
 
 0.890
ENSPCLP00000010082
annotation not available
   
  
 0.889
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.