Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
REC114REC114 meiotic recombination protein. (264 aa)    
Predicted Functional Partners:
ENSPCLP00000013571
annotation not available
   
 0.975
LIG3
DNA ligase 3.
   
 0.969
MEI4
Meiotic double-stranded break formation protein 4.
    
 
 0.937
XRCC4
X-ray repair cross complementing 4.
    
 
 0.919
ENSPCLP00000023644
annotation not available
  
 
 0.882
MEI1
Meiotic double-stranded break formation protein 1.
      
 0.864
NEK9
NIMA related kinase 9.
      
 0.853
POLL
DNA polymerase lambda.
    
 0.852
POLB
DNA polymerase beta.
    
 0.852
NEIL1
Nei like DNA glycosylase 1.
     
 0.851
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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