Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LBRLamin B receptor. (609 aa)    
Predicted Functional Partners:
CYP51A1
Cytochrome P450 family 51 subfamily A member 1.
   
 0.994
MSMO1
Methylsterol monooxygenase 1.
   
 0.981
KPNB1
Karyopherin subunit beta 1.
   
  0.970
C1QBP
Complement C1q binding protein.
    
 
 0.967
DHCR24
24-dehydrocholesterol reductase.
   
 0.966
SC5D
sterol-C5-desaturase.
   
 0.960
SQLE
Squalene epoxidase.
   
 
 0.905
MAD2L1BP
MAD2L1 binding protein.
    
   0.903
SIGMAR1
Sigma non-opioid intracellular receptor 1.
   
 
 0.897
CHTOP
Chromatin target of PRMT1.
    
   0.892
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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