Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
COX5ACytochrome c oxidase subunit 5A. (90 aa)    
Predicted Functional Partners:
ENSPCLP00000014594
annotation not available
   
 0.999
ENSPCLP00000003394
annotation not available
   
 0.998
COX7C
Cytochrome c oxidase subunit 7C.
   
 0.998
COX4I1
Cytochrome c oxidase subunit 4I1.
   
 0.998
COX6A1
Cytochrome c oxidase subunit 6A1.
   
 0.997
UQCRC2
Ubiquinol-cytochrome c reductase core protein 2.
   
 0.996
UQCRQ
Ubiquinol-cytochrome c reductase complex III subunit VII.
   
 0.996
TRIR
Telomerase RNA component interacting RNase.
   
 0.996
UQCRFS1
Ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1.
   
 0.994
UQCR10
Ubiquinol-cytochrome c reductase, complex III subunit X.
   
 0.993
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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