Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SCAMP2Secretory carrier membrane protein 2. (333 aa)    
Predicted Functional Partners:
SCAMP1
Secretory carrier membrane protein 1.
    
   0.939
JAGN1
Jagunal homolog 1.
    
 
 0.659
NET1
Neuroepithelial cell transforming 1.
    
 
 0.643
MBLAC2
Metallo-beta-lactamase domain containing 2.
      
 0.557
SLC25A14
Solute carrier family 25 member 14.
      
 0.556
SLC25A30
Solute carrier family 25 member 30.
      
 0.556
FYCO1
FYVE and coiled-coil domain containing 1.
      
 0.555
PARP1
poly(ADP-ribose) polymerase 1.
      
 0.529
ARHGEF3
Rho guanine nucleotide exchange factor 3.
    
 
 0.520
ENSPCLP00000024181
annotation not available
    
   0.489
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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