Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSPCLP00000001937annotation not available (512 aa)    
Predicted Functional Partners:
ATG13
Autophagy related 13.
   
 0.896
RB1CC1
RB1 inducible coiled-coil 1.
    
 0.893
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 0.892
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
    
 0.891
ENSPCLP00000011594
annotation not available
    
 0.891
ATG101
Autophagy related 101.
    
 0.891
MTOR
Mechanistic target of rapamycin kinase.
    
 0.884
ATG3
Autophagy related 3.
   
 
 0.828
ATG2B
Autophagy related 2B.
   
 
 0.826
ATG14
Autophagy related 14.
    
 0.820
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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