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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CLK3CDC like kinase 3. (477 aa)    
Predicted Functional Partners:
UBE2Q2
Ubiquitin conjugating enzyme E2 Q2.
      
 0.669
PAFAH2
Platelet activating factor acetylhydrolase 2.
      
 0.637
EFHC2
EF-hand domain containing 2.
 
    
 0.569
UCKL1
Uridine-cytidine kinase 1 like 1.
      
 0.567
SCAMP5
Secretory carrier membrane protein 5.
 
    
 0.567
CAB39
Calcium binding protein 39.
      
 0.565
ADPGK
ADP dependent glucokinase.
      
 0.553
CASP8AP2
Caspase 8 associated protein 2.
      
 0.553
TPGS2
Tubulin polyglutamylase complex subunit 2.
      
 0.553
CAPN10
Calpain 10.
      
 0.546
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.