Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ISLRImmunoglobulin superfamily containing leucine rich repeat. (417 aa)    
Predicted Functional Partners:
STOML1
Stomatin like 1.
     
 0.556
BRINP2
BMP/retinoic acid inducible neural specific 2.
   
  
 0.467
BRINP3
BMP/retinoic acid inducible neural specific 3.
   
  
 0.467
G3BP1
G3BP stress granule assembly factor 1.
    
 
 0.459
CHST9
Carbohydrate sulfotransferase 9.
    
  0.454
SAMHD1
SAM and HD domain containing deoxynucleoside triphosphate triphosphohydrolase 1.
      
 0.447
LRRC8B
Leucine rich repeat containing 8 VRAC subunit B.
  
   
 0.415
ENSPCLP00000004340
annotation not available
      
 0.408
LRRC40
Leucine rich repeat containing 40.
    
   0.407
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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