Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STOML1Stomatin like 1. (395 aa)    
Predicted Functional Partners:
ECI2
enoyl-CoA delta isomerase 2.
  
 0.888
CRYL1
Crystallin lambda 1.
  
 0.743
HADH
hydroxyacyl-CoA dehydrogenase.
  
 0.731
ACOX2
acyl-CoA oxidase 2.
  
 0.718
ACOX1
acyl-CoA oxidase 1.
  
 0.718
ACOX3
acyl-CoA oxidase 3, pristanoyl.
  
 0.710
CAT
Catalase.
   
 0.703
HADHB
hydroxyacyl-CoA dehydrogenase trifunctional multienzyme complex subunit beta.
  
 0.701
ETFA
Electron transfer flavoprotein subunit alpha.
  
 0.698
KIFAP3
Kinesin associated protein 3.
      
 0.696
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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