Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A11Solute carrier family 6 member 11. (628 aa)    
Predicted Functional Partners:
IRAK2
Interleukin 1 receptor associated kinase 2.
      
 0.539
GPHN
Gephyrin.
      
 0.466
ENSPCLP00000017183
annotation not available
      
 0.449
TNPO3
Transportin 3.
      
 0.414
ENSPCLP00000015154
annotation not available
      
 0.411
PSMD6
Proteasome 26S subunit, non-ATPase 6.
      
 0.410
PBRM1
Polybromo 1.
      
 0.409
MAPKAPK2
MAPK activated protein kinase 2.
      
 0.408
SLC30A9
Solute carrier family 30 member 9.
  
  
 0.403
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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