STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LINGO1Leucine rich repeat and Ig domain containing 1. (619 aa)    
Predicted Functional Partners:
NGFR
Nerve growth factor receptor.
    
 0.988
OMG
Oligodendrocyte myelin glycoprotein.
   
 0.923
RTN4R
Reticulon 4 receptor.
   
 
 0.867
RTN4
Reticulon 4.
    
 0.853
LINGO2
Leucine rich repeat and Ig domain containing 2.
   
   0.849
RTN1
Reticulon 1.
    
 0.743
ENSPCLP00000025037
annotation not available
    
 0.743
RELN
Reelin.
      
 0.652
GRIA4
Glutamate ionotropic receptor AMPA type subunit 4.
   
 0.647
RHOA
Ras homolog family member A.
    
 0.639
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.