STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HMG20AHigh mobility group 20A. (348 aa)    
Predicted Functional Partners:
KDM1A
Lysine demethylase 1A.
   
 0.993
PHF21A
PHD finger protein 21A.
    
 0.993
PHF14
PHD finger protein 14.
   
 
 0.991
RCOR1
REST corepressor 1.
   
 0.990
HMG20B
High mobility group 20B.
    
 
 0.987
RCOR3
REST corepressor 3.
   
 0.971
SFMBT1
Scm like with four mbt domains 1.
    
 
 0.943
C12orf10
Chromosome 12 open reading frame 10.
    
   0.884
GATAD2B
GATA zinc finger domain containing 2B.
    
 0.822
RAI1
Retinoic acid induced 1.
   
 
 0.816
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.