Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RCN2Reticulocalbin 2. (307 aa)    
Predicted Functional Partners:
ASPM
Abnormal spindle microtubule assembly.
    
 
 0.901
LARP7
La ribonucleoprotein 7, transcriptional regulator.
    
 
 0.701
SPRTN
SprT-like N-terminal domain.
    
   0.700
RECQL4
RecQ like helicase 4.
    
   0.700
BAP1
BRCA1 associated protein 1.
    
   0.700
SCAPER
S-phase cyclin A associated protein in the ER.
      
 0.653
COMTD1
catechol-O-methyltransferase domain containing 1.
      
 0.652
TSPAN3
Tetraspanin 3.
   
  
 0.643
PDAP1
PDGFA associated protein 1.
   
  
 0.634
CLDN20
Claudin 20.
      
 0.615
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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