STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ISL2ISL LIM homeobox 2. (360 aa)    
Predicted Functional Partners:
LDB1
LIM domain binding 1.
    
 0.872
LDB2
LIM domain binding 2.
    
 0.865
LHX4
LIM homeobox 4.
    
 0.825
LHX3
LIM homeobox 3.
    
 0.825
ENSPCLP00000010816
annotation not available
    
 0.761
LMO4
LIM domain only 4.
    
   0.743
ZNF511
Zinc finger protein 511.
    
   0.725
TBX20
T-box transcription factor 20.
    
 0.718
ENSPCLP00000001194
annotation not available
    
   0.717
GATA4
GATA binding protein 4.
    
 0.586
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.