STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRMT6tRNA methyltransferase 6. (484 aa)    
Predicted Functional Partners:
TRMT61A
tRNA methyltransferase 61A.
   
 0.999
TRMT61B
tRNA methyltransferase 61B.
   
 0.997
WDR4
WD repeat domain 4.
   
 0.973
TRMT11
tRNA methyltransferase 11 homolog.
   
 0.973
TRMT10C
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 
 0.973
ENSPCLP00000020167
annotation not available
   
 
 0.961
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 0.955
FTSJ3
FtsJ RNA 2'-O-methyltransferase 3.
   
  
 0.917
WDR12
WD repeat domain 12.
   
    0.883
DDX18
DEAD-box helicase 18.
   
   0.876
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.