Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
OTOP1Otopetrin 1. (608 aa)    
Predicted Functional Partners:
ENSPCLP00000004056
annotation not available
      
 0.734
CALHM1
Calcium homeostasis modulator 1.
   
  
 0.615
TECTA
Tectorin alpha.
      
 0.615
OTOL1
Otolin 1.
      
 0.614
SPARC
Secreted protein acidic and cysteine rich.
      
 0.594
TMEM128
Transmembrane protein 128.
      
 0.558
PKD2L1
Polycystin 2 like 1, transient receptor potential cation channel.
      
 0.558
PHTF2
Putative homeodomain transcription factor 2.
      
 0.556
RFTN2
Raftlin family member 2.
      
 0.556
ARMC9
Armadillo repeat containing 9.
      
 0.555
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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