STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB28RAB28, member RAS oncogene family. (223 aa)    
Predicted Functional Partners:
DACH1
Dachshund family transcription factor 1.
      
 0.818
GDI2
GDP dissociation inhibitor 2.
   
 0.677
TBC1D4
TBC1 domain family member 4.
   
 0.623
MAF
MAF bZIP transcription factor.
      
 0.616
INPP5E
Inositol polyphosphate-5-phosphatase E.
    
 
 0.594
DENND3
DENN domain containing 3.
    
 0.586
ZNF827
Zinc finger protein 827.
    
 
 0.585
ENSPCLP00000025213
annotation not available
    
 
 0.585
ENSPCLP00000003207
annotation not available
    
 0.581
RAB3IL1
RAB3A interacting protein like 1.
    
 0.581
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.