Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
POLR1BRNA polymerase I subunit B. (1255 aa)    
Predicted Functional Partners:
POLR1C
RNA polymerase I and III subunit C.
  
 0.999
POLR1A
RNA polymerase I subunit A.
  
 0.999
TWISTNB
TWIST neighbor.
   
 0.999
POLR2H
RNA polymerase II subunit H.
   
 0.999
POLR2F
RNA polymerase II subunit F.
  
 0.999
POLR2E
RNA polymerase II subunit E.
  
 0.999
POLR1E
RNA polymerase I subunit E.
   
 0.999
POLR2L
RNA polymerase II subunit L.
   
 0.999
ENSPCLP00000003404
annotation not available
   
 0.996
POLR1D
RNA polymerase I and III subunit D.
   
 0.995
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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