STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APMAPAdipocyte plasma membrane associated protein. (415 aa)    
Predicted Functional Partners:
FDXACB1
Ferredoxin-fold anticodon binding domain containing 1.
  
  
 0.917
RPL23A
Ribosomal protein L23a.
  
    0.865
SUPV3L1
Suv3 like RNA helicase.
   
 0.865
MTIF2
Mitochondrial translational initiation factor 2.
  
  
 0.860
EIF5B
Eukaryotic translation initiation factor 5B.
  
  
 0.860
MRPL20
Mitochondrial ribosomal protein L20.
  
  
 0.844
TRNT1
tRNA nucleotidyl transferase 1.
  
 0.835
IMP3
IMP U3 small nucleolar ribonucleoprotein 3.
  
  
 0.834
ENSPCLP00000022861
annotation not available
  
  
 0.834
CTPS1
CTP synthase 1.
  
  
 0.825
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.