Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MED28Mediator complex subunit 28. (178 aa)    
Predicted Functional Partners:
MED29
Mediator complex subunit 29.
    
 0.981
MED22
Mediator complex subunit 22.
   
 
 0.836
ENSPCLP00000001353
annotation not available
    
 0.804
MED20
Mediator complex subunit 20.
   
 0.789
MED8
Mediator complex subunit 8.
   
 
 0.752
MED7
Mediator complex subunit 7.
     
 0.744
MED14
Mediator complex subunit 14.
     
 0.741
MED30
Mediator complex subunit 30.
     
 0.736
MED19
Mediator complex subunit 19.
     
 0.731
ENSPCLP00000014474
annotation not available
     
 0.718
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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