STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SMIM20Small integral membrane protein 20. (60 aa)    
Predicted Functional Partners:
MYL1
Myosin light chain 1.
   
 0.921
TNNC2
Troponin C2, fast skeletal type.
   
 0.920
TNNI3
Troponin I3, cardiac type.
   
 0.879
TNNI1
Troponin I1, slow skeletal type.
   
 0.879
TNNI2
Troponin I2, fast skeletal type.
   
 0.879
TNNC1
Troponin C1, slow skeletal and cardiac type.
   
 0.871
ENSPCLP00000017573
annotation not available
   
 0.778
GPR27
G protein-coupled receptor 27.
      
 0.773
TPM1
Tropomyosin 1.
   
 0.772
TPM4
Tropomyosin 4.
   
 0.772
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.