Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PTPRKProtein tyrosine phosphatase receptor type K. (1445 aa)    
Predicted Functional Partners:
ENSPCLP00000019157
annotation not available
   
 
 0.929
EDN3
Endothelin 3.
      
 0.925
PTPRU
Protein tyrosine phosphatase receptor type U.
   
   0.919
KIAA0408
KIAA0408.
      
 0.580
WAC
WW domain containing adaptor with coiled-coil.
      
 0.554
C6orf58
Chromosome 6 open reading frame 58.
      
 0.554
RNF146
Ring finger protein 146.
    
 
 0.501
AKT3
AKT serine/threonine kinase 3.
    
 0.490
AKT1
AKT serine/threonine kinase 1.
    
 0.490
ENSPCLP00000019925
annotation not available
    
 0.490
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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