STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USP46Ubiquitin specific peptidase 46. (381 aa)    
Predicted Functional Partners:
WDR48
WD repeat domain 48.
    
 0.983
ENSPCLP00000006338
annotation not available
    
 0.922
ENSPCLP00000006339
annotation not available
    
 0.918
FANCD2
FA complementation group D2.
    
 0.818
UBA52
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.756
ENSPCLP00000015797
annotation not available
    
  0.702
ENSPCLP00000004804
annotation not available
    
  0.695
FANCI
FA complementation group I.
    
 0.694
USP8
Ubiquitin specific peptidase 8.
     
0.631
ATAD5
ATPase family AAA domain containing 5.
    
 0.631
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.