Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MSANTD3Myb/SANT DNA binding domain containing 3. (243 aa)    
Predicted Functional Partners:
ENSPCLP00000003288
annotation not available
 
      0.591
ZDHHC8
Zinc finger DHHC-type containing 8.
    
   0.560
ZDHHC5
Zinc finger DHHC-type containing 5.
    
   0.560
CLDND1
Claudin domain containing 1.
    
   0.559
AACS
acetoacetyl-CoA synthetase.
      
 0.462
ENSPCLP00000015046
annotation not available
    
 0.456
USH2A
Usherin.
      
 0.450
TLK1
Tousled like kinase 1.
      
 0.439
NDFIP2
Nedd4 family interacting protein 2.
      
 0.438
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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