STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IRX2Iroquois homeobox 2. (477 aa)    
Predicted Functional Partners:
IRX3
Iroquois homeobox 3.
   
  
 0.645
HOXD12
Homeobox D12.
    
 
 0.536
SRF
Serum response factor.
   
 
 0.508
PBX1
PBX homeobox 1.
    
 0.480
ENSPCLP00000011517
annotation not available
    
 0.480
PBX4
PBX homeobox 4.
    
 0.480
TSHZ3
Teashirt zinc finger homeobox 3.
    
 0.459
FOXN4
Forkhead box N4.
    
 
 0.455
ENSPCLP00000012810
annotation not available
    
 
 0.443
ARID4B
AT-rich interaction domain 4B.
    
 
 0.424
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.