Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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[Homology]
Score
ADAMTS20ADAM metallopeptidase with thrombospondin type 1 motif 20. (1907 aa)    
Predicted Functional Partners:
BAP1
BRCA1 associated protein 1.
    
 
 0.567
ECT2
Epithelial cell transforming 2.
      
 0.556
PBRM1
Polybromo 1.
      
 0.536
B3GLCT
Beta 3-glucosyltransferase.
    
 0.515
ADAMTS4
ADAM metallopeptidase with thrombospondin type 1 motif 4.
    
 0.476
ADAMTS7
ADAM metallopeptidase with thrombospondin type 1 motif 7.
     
 0.456
ADAMTS12
ADAM metallopeptidase with thrombospondin type 1 motif 12.
     
 0.456
TSR3
TSR3 ribosome maturation factor.
      
 0.448
SETD2
SET domain containing 2, histone lysine methyltransferase.
      
 0.448
ENSPCLP00000018420
annotation not available
    
 0.445
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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