STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SRRSerine racemase. (333 aa)    
Predicted Functional Partners:
SDSL
Serine dehydratase like.
  
  
0.960
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 
 0.938
PSPH
Phosphoserine phosphatase.
    
 0.931
ENSPCLP00000008539
annotation not available
    
0.929
ENSPCLP00000008561
annotation not available
    
0.929
ENSPCLP00000015735
annotation not available
  
  
0.925
SHMT1
Serine hydroxymethyltransferase 1.
    
 0.923
SHMT2
Serine hydroxymethyltransferase 2.
    
 0.920
SPTLC3
Serine palmitoyltransferase long chain base subunit 3.
   
 0.889
SPTLC2
Serine palmitoyltransferase long chain base subunit 2.
   
 0.889
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.