Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
NEDD9Neural precursor cell expressed, developmentally down-regulated 9. (826 aa)    
Predicted Functional Partners:
CRKL
CRK like proto-oncogene, adaptor protein.
    
 0.980
CRK
CRK proto-oncogene, adaptor protein.
    
 0.957
BCAR1
BCAR1 scaffold protein, Cas family member.
    
   0.939
BCAR3
BCAR3 adaptor protein, NSP family member.
    
 0.900
LUM
Lumican.
    
 
 0.897
VCL
Vinculin.
    
 0.896
GRIN3A
Glutamate ionotropic receptor NMDA type subunit 3A.
      
 0.879
PTK2
Protein tyrosine kinase 2.
    
 0.876
PTK2B
Protein tyrosine kinase 2 beta.
    
 0.876
SH2D3C
SH2 domain containing 3C.
    
 0.864
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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