Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LRWD1Leucine rich repeats and WD repeat domain containing 1. (750 aa)    
Predicted Functional Partners:
ORC4
Origin recognition complex subunit 4.
    
 0.996
ORC5
Origin recognition complex subunit 5.
    
 0.995
ORC3
Origin recognition complex subunit 3.
    
 0.995
ORC2
Origin recognition complex subunit 2.
    
 0.994
ORC1
Origin recognition complex subunit 1.
    
 0.911
ORC6
Origin recognition complex subunit 6.
    
 0.791
CLBA1
Clathrin binding box of aftiphilin containing 1.
      
 0.733
TICRR
TOPBP1 interacting checkpoint and replication regulator.
    
 
 0.641
CUL1
Cullin 1.
    
  0.636
SKP2
S-phase kinase associated protein 2.
    
 
 0.621
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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