Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MICAL3Microtubule associated monooxygenase, calponin and LIM domain containing 3. (1953 aa)    
Predicted Functional Partners:
RAB1A
RAB1A, member RAS oncogene family.
    
 
 0.775
ENSPCLP00000004357
annotation not available
    
 
 0.746
ENSPCLP00000006494
annotation not available
    
 
 0.746
SLC16A9
Solute carrier family 16 member 9.
      
 0.615
RBBP6
RB binding protein 6, ubiquitin ligase.
      
 0.615
NEDD9
Neural precursor cell expressed, developmentally down-regulated 9.
    
 
 0.587
RAB10
RAB10, member RAS oncogene family.
    
 
 0.569
RAB8B
RAB8B, member RAS oncogene family.
    
 
 0.555
RAB8A
RAB8A, member RAS oncogene family.
    
 
 0.555
RAB15
RAB15, member RAS oncogene family.
    
 
 0.555
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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