STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GASK1AGolgi associated kinase 1A. (306 aa)    
Predicted Functional Partners:
MAB21L3
Mab-21 like 3.
   
    0.965
FAM20B
FAM20B glycosaminoglycan xylosylkinase.
      
 0.686
FJX1
Four-jointed box kinase 1.
      
 0.653
ENSPCLP00000017643
annotation not available
      
 0.567
LSG1
Large 60S subunit nuclear export GTPase 1.
      
 0.557
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
      
 0.557
ENSPCLP00000014277
annotation not available
      
 0.557
HEXD
Hexosaminidase D.
      
 0.555
ENSPCLP00000000756
annotation not available
      
 0.455
TMEM150C
Transmembrane protein 150C.
      
 0.437
Your Current Organism:
Phasianus colchicus
NCBI taxonomy Id: 9054
Other names: P. colchicus, Ring-necked pheasant, common pheasant
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